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Patient ID
119387
Open Patient
Specimen ID
122-R
Disease Body Location
Respiratory/Thoracic
OncoTree Code
LUSC
CTEP SDC Code
10025126 - Squamous cell lung carcinoma
Human Pathogen
Testing Summary
Negative
Tissue Type
Resection
Tissue Collected
Lung [RUL]
Provided Tissue Origin
Primary
Collection Date
05/2017
Age at Sampling
50
General Model Information
Model Notes
NGS Characterization
Able to Viably Passage
into Athymic Nude Mice?
Unknown
Mouse Strain Used
for Engraftment
NSG (NOD.Cg-Prkdc[scid]Il2rg[tm1Wjl]/SzJ)
Viable Passage
Implantation Site
Subcutaneous (flank)
MSI Status
MSI-Stable
HLA Profile(s)
A1
A2
B1
B2
C1
C2
PDX Concordance / PDM Type
A*24:02
A*68:02
B*14:02
B*35:08
C*04:01
C*08:02
5/5
PDX Metastatic in NSG?
Not Observed
PDX Growth Curve Data (if available)
Growth Curve Analysis
View
Passage
Growth Curve
Growth Curve Notes
0
1
2
3
Export
Consensus Genomic Variants from WES Files
External Consensus Genomic Variants Data
A data file is available if a Download link is displayed:
Consensus Whole Exome Sequence (*.vcf)
Download
Ver:
2.0
Consensus Whole Exome Sequence, annotated (*.maf)
Download
Ver:
2.0
Distribution Lots
View
PDM Type
Name
Max. Passage
Cryovial for
PDX Generation
In Vitro
Culture Material
PDX
DNA Vials
PDX
RNA Vials
PDX Flash-
Frozen Vials
CAF Culture
119387-122-R-J1-CAF
18
Not Applicable
Available
Not Applicable
Not Applicable
Not Applicable
Organoid Culture
119387-122-R-V2-organoid
17
Not Applicable
Available
Not Applicable
Not Applicable
Not Applicable
Export
Sample (PDX)
View
PDM Type
Sample ID
Patient/Originating
Specimen
PDX Passage
Sample Images
Avail
OncoKB Gene
Panel Data
Whole Exome
Sequence Avail
RNASeq
Avail
CAF Culture
J1-CAF
No
Yes
No
No
No
Organoid Culture
V2-organoid
No
Yes
Yes
Yes
Yes
Patient/Originator Specimen
ORIGINATOR
Yes
Yes
No
No
No
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