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Patient ID
133474
Open Patient
Specimen ID
215-R2
Disease Body Location
Digestive/Gastrointestinal
OncoTree Code
IHCH
CTEP SDC Code
10004669 - Cholangiocar.- intra/extrahepatic
Human Pathogen
Testing Summary
Negative
Tissue Type
Resection
Tissue Collected
Liver [Z]
Provided Tissue Origin
Metastatic Site
Collection Date
08/2023
Age at Sampling
37
General Model Information
Model Notes
IHC/Path notes: CK19+ vimentin+, CK7 (occasional +) consist with choalgio with diffuse rhabdoid changes
NGS Characterization
Able to Viably Passage
into Athymic Nude Mice?
Yes
Mouse Strain Used
for Engraftment
NSG (NOD.Cg-Prkdc[scid]Il2rg[tm1Wjl]/SzJ)
Viable Passage
Implantation Site
Subcutaneous (flank)
MSI Status
MSI-Stable
HLA Profile(s)
PDX Metastatic in NSG?
Not Observed
PDX Growth Curve Data (if available)
Growth Curve Analysis
View
Passage
Growth Curve
Growth Curve Notes
0
1
2
Export
Consensus Genomic Variants from WES Files
External Consensus Genomic Variants Data
A data file is available if a Download link is displayed:
Consensus Whole Exome Sequence (*.vcf)
Download
Ver:
2.0
Consensus Whole Exome Sequence, annotated (*.maf)
Download
Ver:
2.0
Distribution Lots
View
PDM Type
Name
Max. Passage
Cryovial for
PDX Generation
In Vitro
Culture Material
PDX
DNA Vials
PDX
RNA Vials
PDX Flash-
Frozen Vials
PDX
133474-215-R2
2
Available
Not Applicable
Available Upon Request
Available Upon Request
Available
Export
Sample (PDX)
View
PDM Type
Sample ID
Patient/Originating
Specimen
PDX Passage
Sample Images
Avail
OncoKB Gene
Panel Data
Whole Exome
Sequence Avail
RNASeq
Avail
PDX
PUJ
No
0
Yes
No
No
No
PDX
PUH
No
0
Yes
No
No
No
PDX
PUGM067
No
1
Yes
Yes
Yes
Yes
PDX
PUHA23
No
1
Yes
Yes
Yes
Yes
PDX
PUJC32
No
1
Yes
Yes
Yes
Yes
PDX
PUJC31M702
No
2
Yes
No
No
No
PDX
PUG
No
0
Yes
No
No
No
PDX
PUK
No
0
Yes
No
No
No
PDX
PUN
No
0
Yes
Yes
Yes
Yes
Export
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