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Patient ID
126767
Open Patient
Specimen ID
308-R
Disease Body Location
Musculoskeletal
OncoTree Code
DDLS
CTEP SDC Code
10024631 - Liposarcoma
Human Pathogen
Testing Summary
Negative
Tissue Type
Resection
Tissue Collected
Abdominal Mass
Provided Tissue Origin
Primary
Collection Date
11/2020
Age at Sampling
70
General Model Information
Model Notes
PDX IHC/Path: Vimentin+ (cytoplasmic ), P16+ (strong nuclear & cytoplasmic), consistent with liposarcoma
NGS Characterization
Able to Viably Passage
into Athymic Nude Mice?
Yes
Mouse Strain Used
for Engraftment
NSG (NOD.Cg-Prkdc[scid]Il2rg[tm1Wjl]/SzJ)
Viable Passage
Implantation Site
Subcutaneous (flank)
MSI Status
MSI-Stable
HLA Profile(s)
A1
A2
B1
B2
C1
C2
PDX Concordance / PDM Type
A*02:01
A*03:01
B*07:02
B*40:02
C*02:02
C*07:02
6/6
PDX Metastatic in NSG?
Not Observed
PDX Growth Curve Data (if available)
Growth Curve Analysis
View
Passage
Growth Curve
Growth Curve Notes
0
1
2
Export
Consensus Genomic Variants from WES Files
External Consensus Genomic Variants Data
A data file is available if a Download link is displayed:
Consensus Whole Exome Sequence (*.vcf)
Download
Ver:
2.0
Consensus Whole Exome Sequence, annotated (*.maf)
Download
Ver:
2.0
Distribution Lots
View
PDM Type
Name
Max. Passage
Cryovial for
PDX Generation
In Vitro
Culture Material
PDX
DNA Vials
PDX
RNA Vials
PDX Flash-
Frozen Vials
PDX
126767-308-R
2
Available
Not Applicable
Available Upon Request
Available Upon Request
Available
Export
Sample (PDX)
View
PDM Type
Sample ID
Patient/Originating
Specimen
PDX Passage
Sample Images
Avail
OncoKB Gene
Panel Data
Whole Exome
Sequence Avail
RNASeq
Avail
PDX
Q85
No
0
Yes
No
No
No
PDX
Q86
No
0
Yes
No
No
No
PDX
Q87
No
0
Yes
Yes
Yes
Yes
PDX
Q88
No
0
Yes
No
No
No
PDX
Q89
No
0
Yes
Yes
Yes
Yes
PDX
Q85E60
No
1
Yes
Yes
Yes
Yes
PDX
Q86E10
No
1
Yes
Yes
Yes
Yes
PDX
Q87C66
No
1
Yes
Yes
Yes
Yes
PDX
Q86E10F03
No
2
Yes
Yes
Yes
Yes
Export
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