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Patient ID
114551
Open Patient
Specimen ID
080-T
Disease Body Location
Head and Neck
OncoTree Code
ACCC
CTEP SDC Code
10039397 - Salivary gland cancer
Human Pathogen
Testing Summary
Negative
Tissue Type
Tumor Biopsy
Tissue Collected
Pleura [R]
Provided Tissue Origin
Metastatic Site
Collection Date
03/2013
Age at Sampling
52
General Model Information
Model Notes
NGS Characterization
Able to Viably Passage
into Athymic Nude Mice?
Unknown
Mouse Strain Used
for Engraftment
NSG (NOD.Cg-Prkdc[scid]Il2rg[tm1Wjl]/SzJ)
Viable Passage
Implantation Site
Subcutaneous (flank)
MSI Status
MSI-Stable
HLA Profile(s)
A1
A2
B1
B2
C1
C2
PDX Concordance / PDM Type
A*03:01
A*30:01
B*42:01
B*49:01
C*07:01
C*17:01
9/9
PDX Metastatic in NSG?
Not Observed
PDX Growth Curve Data (if available)
Growth Curve Analysis
View
Passage
Growth Curve
Growth Curve Notes
0
1
2
Export
Consensus Genomic Variants from WES Files
External Consensus Genomic Variants Data
A data file is available if a Download link is displayed:
Consensus Whole Exome Sequence (*.vcf)
Download
Ver:
2.0
Consensus Whole Exome Sequence, annotated (*.maf)
Download
Ver:
2.0
Distribution Lots
View
PDM Type
Name
Max. Passage
Cryovial for
PDX Generation
In Vitro
Culture Material
PDX
DNA Vials
PDX
RNA Vials
PDX Flash-
Frozen Vials
Organoid Culture
114551-080-T-V1-organoid
12
Not Applicable
Available
Not Applicable
Not Applicable
Not Applicable
PDX
114551-080-T
3
Available
Not Applicable
Available
Available Upon Request
Available
Export
Sample (PDX)
View
PDM Type
Sample ID
Patient/Originating
Specimen
PDX Passage
Sample Images
Avail
OncoKB Gene
Panel Data
Whole Exome
Sequence Avail
RNASeq
Avail
Organoid Culture
V1-organoid
No
Yes
Yes
Yes
Yes
PDX
M676
No
0
Yes
Yes
Yes
Yes
PDX
M667
No
0
Yes
No
No
No
PDX
M667M226
No
1
Yes
Yes
Yes
No
PDX
M667M226C21
No
2
Yes
Yes
Yes
No
PDX
M667M227
No
1
Yes
No
No
No
PDX
M667M228
No
1
Yes
Yes
Yes
No
PDX
M667M229
No
1
Yes
No
No
No
PDX
M667M229C04
No
2
Yes
Yes
Yes
No
PDX
M667M226C29
No
2
Yes
Yes
Yes
Yes
PDX
M667M228C43
No
2
Yes
Yes
Yes
Yes
PDX
M667M229C06
No
2
Yes
Yes
Yes
Yes
PDX
M667M227C30
No
2
Yes
Yes
Yes
Yes
Export
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