Skip to Content
Contact PDMR
|
PDMR Database User Guide
Home
Patient
Patient Specimen
Sample (PDX or In Vitro Culture)
Distribution Lots
Genomic Analysis
Reports
Search
Specimen
Cancel
Patient ID
BL0382
Open Patient
Specimen ID
F1232
Disease Body Location
Genitourinary
OncoTree Code
BLCA
CTEP SDC Code
10018192 - Urothelial/bladder cancer, NOS
Human Pathogen
Testing Summary
Negative
Tissue Type
Resection
Tissue Collected
Bladder
Provided Tissue Origin
Primary
Collection Date
09/2011
Age at Sampling
82
General Model Information
Model Notes
NGS Characterization
Able to Viably Passage
into Athymic Nude Mice?
Unknown
Mouse Strain Used
for Engraftment
NSG (NOD.Cg-Prkdc[scid]Il2rg[tm1Wjl]/SzJ)
Viable Passage
Implantation Site
Subcutaneous (flank)
MSI Status
MSI-Stable
HLA Profile(s)
A1
A2
B1
B2
C1
C2
PDX Concordance / PDM Type
A*02:01
A*29:02
B*44:02
B*44:02
C*05:01
C*16:01
2/5
A*02:01
A*29:02
B*44:02
B*44:03
C*05:01
C*16:01
3/5
PDX Metastatic in NSG?
Not Observed
PDX Growth Curve Data (if available)
Growth Curve Analysis
View
Passage
Growth Curve
Growth Curve Notes
0
1
2
6 of 10 models were passaged/sac'd ~31 days creating appearance of growth rate decline.
Export
Consensus Genomic Variants from WES Files
External Consensus Genomic Variants Data
A data file is available if a Download link is displayed:
Consensus Whole Exome Sequence (*.vcf)
Download
Ver:
2.0
Consensus Whole Exome Sequence, annotated (*.maf)
Download
Ver:
2.0
Distribution Lots
View
PDM Type
Name
Max. Passage
Cryovial for
PDX Generation
In Vitro
Culture Material
PDX
DNA Vials
PDX
RNA Vials
PDX Flash-
Frozen Vials
PDX
BL0382-F1232
4
Available
Not Applicable
Available Upon Request
Available Upon Request
Available
Export
Sample (PDX)
View
PDM Type
Sample ID
Patient/Originating
Specimen
PDX Passage
Sample Images
Avail
OncoKB Gene
Panel Data
Whole Exome
Sequence Avail
RNASeq
Avail
PDX
M663
No
2
Yes
No
No
No
PDX
P1_001
No
1
Yes
No
No
No
PDX
M663M48M874
No
4
Yes
Yes
Yes
No
PDX
M663M48M873
No
4
Yes
Yes
Yes
Yes
PDX
M662
No
2
Yes
Yes
Yes
Yes
PDX
M664
No
2
Yes
No
No
No
PDX
M662M18
No
3
Yes
Yes
Yes
Yes
PDX
M664M220
No
3
Yes
Yes
Yes
Yes
Patient/Originator Specimen
ORIGINATOR
Yes
Yes
No
No
No
Export
1 - 9