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Patient ID
172845
Open Patient
Specimen ID
142-T
Disease Body Location
Digestive/Gastrointestinal
OncoTree Code
COAD
CTEP SDC Code
10009951 - Adenocarcinoma - colon
Human Pathogen
Testing Summary
Negative
Tissue Type
Tumor Biopsy
Tissue Collected
Liver
Provided Tissue Origin
Metastatic Site
Collection Date
05/2013
Age at Sampling
46
General Model Information
Model Notes
Time point: On-study
NGS Characterization
Able to Viably Passage
into Athymic Nude Mice?
Unknown
Mouse Strain Used
for Engraftment
NSG (NOD.Cg-Prkdc[scid]Il2rg[tm1Wjl]/SzJ)
Viable Passage
Implantation Site
Subcutaneous (flank)
MSI Status
MSI-Stable
HLA Profile(s)
A1
A2
B1
B2
C1
C2
PDX Concordance / PDM Type
A*01:01
A*32:01
B*08:01
B*14:01
C*07:01
C*08:02
6/6
CMS Category
CMS3
PDX Metastatic in NSG?
Not Observed
PDX Growth Curve Data (if available)
Growth Curve Analysis
View
Passage
Growth Curve
Growth Curve Notes
0
1
2
Export
Consensus Genomic Variants from WES Files
External Consensus Genomic Variants Data
A data file is available if a Download link is displayed:
Consensus Whole Exome Sequence (*.vcf)
Download
Ver:
2.0
Consensus Whole Exome Sequence, annotated (*.maf)
Download
Ver:
2.0
Distribution Lots
View
PDM Type
Name
Max. Passage
Cryovial for
PDX Generation
In Vitro
Culture Material
PDX
DNA Vials
PDX
RNA Vials
PDX Flash-
Frozen Vials
PDX
172845-142-T
2
Available
Not Applicable
Available
Available Upon Request
Available
Export
Sample (PDX)
View
PDM Type
Sample ID
Patient/Originating
Specimen
PDX Passage
Sample Images
Avail
OncoKB Gene
Panel Data
Whole Exome
Sequence Avail
RNASeq
Avail
PDX
M80
No
0
Yes
Yes
Yes
Yes
PDX
M80J08
No
1
Yes
Yes
Yes
Yes
PDX
M80J08J61
No
2
Yes
Yes
Yes
Yes
PDX
M80J07JA4
No
2
Yes
Yes
Yes
Yes
PDX
M80J09J86
No
2
Yes
Yes
Yes
Yes
PDX
M80J09J83
No
2
Yes
Yes
Yes
Yes
Export
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