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Patient ID
833975
Open Patient
Specimen ID
119-R
Disease Body Location
Digestive/Gastrointestinal
OncoTree Code
PAAD
CTEP SDC Code
10052747 - Adenocarcinoma - pancreas
Human Pathogen
Testing Summary
Negative
Tissue Type
Resection
Tissue Collected
Pancreas
Provided Tissue Origin
Primary
Collection Date
04/2014
Age at Sampling
68
General Model Information
Model Notes
PDX Derivation/Growth: Slow growing model, 100-200 days to reach 500mm3 from cryo.
NGS Characterization
Able to Viably Passage
into Athymic Nude Mice?
Unknown
Mouse Strain Used
for Engraftment
NSG (NOD.Cg-Prkdc[scid]Il2rg[tm1Wjl]/SzJ)
Viable Passage
Implantation Site
Subcutaneous (flank)
MSI Status
MSI-Stable
HLA Profile(s)
A1
A2
B1
B2
C1
C2
PDX Concordance / PDM Type
A*01:01
A*03:01
B*27:05
B*35:03
C*01:02
C*12:03
4/4
PDX Metastatic in NSG?
Not Observed
PDX Growth Curve Data (if available)
Growth Curve Analysis
View
Passage
Growth Curve
Growth Curve Notes
0
1
2
Export
Consensus Genomic Variants from WES Files
External Consensus Genomic Variants Data
A data file is available if a Download link is displayed:
Consensus Whole Exome Sequence (*.vcf)
Download
Ver:
2.0
Consensus Whole Exome Sequence, annotated (*.maf)
Download
Ver:
2.0
Distribution Lots
View
PDM Type
Name
Max. Passage
Cryovial for
PDX Generation
In Vitro
Culture Material
PDX
DNA Vials
PDX
RNA Vials
PDX Flash-
Frozen Vials
CAF Culture
833975-119-R-CAF
16
Not Applicable
Available
Not Applicable
Not Applicable
Not Applicable
PDX
833975-119-R
2
Available
Not Applicable
Available Upon Request
Available Upon Request
Available
Export
Sample (PDX)
View
PDM Type
Sample ID
Patient/Originating
Specimen
PDX Passage
Sample Images
Avail
OncoKB Gene
Panel Data
Whole Exome
Sequence Avail
RNASeq
Avail
CAF Culture
CAF
No
Yes
No
No
No
PDX
EN1
No
0
Yes
Yes
Yes
Yes
PDX
EN3
No
0
Yes
Yes
Yes
Yes
PDX
EN1L20X95
No
2
Yes
Yes
Yes
Yes
PDX
EN0FE5
No
1
Yes
No
No
No
PDX
EN3YN1
No
1
Yes
No
No
No
PDX
EN3YN2
No
1
Yes
Yes
Yes
Yes
Export
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