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Patient ID
521955
Open Patient
Specimen ID
158-R6
Disease Body Location
Digestive/Gastrointestinal
OncoTree Code
PAAD
CTEP SDC Code
10052747 - Adenocarcinoma - pancreas
Human Pathogen
Testing Summary
Negative
Tissue Type
Resection
Tissue Collected
Myometrium
Provided Tissue Origin
Metastatic Site
Collection Date
06/2016
Age at Sampling
64
General Model Information
Model Notes
NGS Characterization
Able to Viably Passage
into Athymic Nude Mice?
Yes
Mouse Strain Used
for Engraftment
NSG (NOD.Cg-Prkdc[scid]Il2rg[tm1Wjl]/SzJ)
Viable Passage
Implantation Site
Subcutaneous (flank)
MSI Status
MSI-Stable
HLA Profile(s)
A1
A2
B1
B2
C1
C2
PDX Concordance / PDM Type
A*02:01
A*24:02
B*18:01
B*44:05
C*02:02
C*07:01
7/7
PDX Metastatic in NSG?
Not Observed
PDX Growth Curve Data (if available)
Growth Curve Analysis
View
Passage
Growth Curve
Growth Curve Notes
0
1
2
3
Export
Consensus Genomic Variants from WES Files
External Consensus Genomic Variants Data
A data file is available if a Download link is displayed:
Consensus Whole Exome Sequence (*.vcf)
Download
Ver:
2.0
Consensus Whole Exome Sequence, annotated (*.maf)
Download
Ver:
2.0
Distribution Lots
View
PDM Type
Name
Max. Passage
Cryovial for
PDX Generation
In Vitro
Culture Material
PDX
DNA Vials
PDX
RNA Vials
PDX Flash-
Frozen Vials
CAF Culture
521955-158-R6-J1-CAF
14
Not Applicable
Available
Not Applicable
Not Applicable
Not Applicable
Organoid Culture
521955-158-R6-V4-organoid
10
Not Applicable
Available
Not Applicable
Not Applicable
Not Applicable
PDC: Mixed Tumor Culture
521955-158-R6-J3-PDC
21
Not Applicable
Available
Not Applicable
Not Applicable
Not Applicable
PDX
521955-158-R6
3
Available
Not Applicable
Available Upon Request
Available Upon Request
Available
Export
Sample (PDX)
View
PDM Type
Sample ID
Patient/Originating
Specimen
PDX Passage
Sample Images
Avail
OncoKB Gene
Panel Data
Whole Exome
Sequence Avail
RNASeq
Avail
CAF Culture
J1-CAF
No
Yes
No
No
No
Organoid Culture
V4-organoid
No
Yes
Yes
Yes
Yes
PDC: Mixed Tumor Culture
J3-PDC
No
Yes
Yes
Yes
Yes
PDX
H3C
No
0
Yes
Yes
Yes
Yes
PDX
H5C
No
0
Yes
No
No
No
PDX
H4C
No
0
Yes
No
No
No
PDX
H2C
No
0
Yes
Yes
Yes
Yes
PDX
H3CDV3FT4
No
2
Yes
No
No
No
PDX
H3CDV4FV7
No
2
Yes
No
No
No
PDX
H4CGA1
No
1
Yes
Yes
Yes
Yes
PDX
H5CDY3
No
1
Yes
No
No
No
PDX
H3CDV4FV5
No
2
No
Yes
Yes
Yes
PDX
H3CDV5FK0GV8
No
3
No
Yes
Yes
Yes
PDX
H5CDY3GN6
No
2
No
Yes
Yes
Yes
Patient/Originator Specimen
ORIGINATOR
Yes
Yes
Yes
Yes
Yes
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