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Patient ID
165739
Open Patient
Specimen ID
295-R
Disease Body Location
Digestive/Gastrointestinal
OncoTree Code
PAAD
CTEP SDC Code
10052747 - Adenocarcinoma - pancreas
Human Pathogen
Testing Summary
Negative
Tissue Type
Resection
Tissue Collected
Pancreas
Provided Tissue Origin
Primary
Collection Date
10/2014
Age at Sampling
70
General Model Information
Model Notes
NGS Characterization
Able to Viably Passage
into Athymic Nude Mice?
Unknown
Mouse Strain Used
for Engraftment
NSG (NOD.Cg-Prkdc[scid]Il2rg[tm1Wjl]/SzJ)
Viable Passage
Implantation Site
Subcutaneous (flank)
MSI Status
MSI-Stable
HLA Profile(s)
A1
A2
B1
B2
C1
C2
PDX Concordance / PDM Type
A*01:01
A*01:01
B*08:01
B*57:01
C*06:02
C*07:01
6/6
PDX Metastatic in NSG?
Not Observed
PDX Growth Curve Data (if available)
Growth Curve Analysis
View
Passage
Growth Curve
Growth Curve Notes
0
There is a wide range in growth rates in passage 0 of this model (growth to 1000mg ranged from 69-115d). 4 of 5 models were passaged/SAC’d by day 95 resulting in appearance of significant growth rate decline after ~day 100.
1
1 of 3 mice with significantly slower growth rate resulting in wide SD.
2
Export
Consensus Genomic Variants from WES Files
External Consensus Genomic Variants Data
A data file is available if a Download link is displayed:
Consensus Whole Exome Sequence (*.vcf)
Download
Ver:
2.0
Consensus Whole Exome Sequence, annotated (*.maf)
Download
Ver:
2.0
Distribution Lots
View
PDM Type
Name
Max. Passage
Cryovial for
PDX Generation
In Vitro
Culture Material
PDX
DNA Vials
PDX
RNA Vials
PDX Flash-
Frozen Vials
PDX
165739-295-R
2
Available
Not Applicable
Available
Available Upon Request
Available
Export
Sample (PDX)
View
PDM Type
Sample ID
Patient/Originating
Specimen
PDX Passage
Sample Images
Avail
OncoKB Gene
Panel Data
Whole Exome
Sequence Avail
RNASeq
Avail
PDX
AM1
No
0
Yes
Yes
Yes
Yes
PDX
AM2
No
0
Yes
Yes
Yes
Yes
PDX
AM3
No
0
Yes
No
No
No
PDX
AM4
No
0
Yes
No
No
No
PDX
AM1I30
No
1
Yes
Yes
Yes
Yes
PDX
AM2I33
No
1
Yes
Yes
Yes
Yes
PDX
AM3IA7
No
1
Yes
Yes
Yes
Yes
PDX
AM4IJ6
No
1
Yes
Yes
Yes
Yes
Patient/Originator Specimen
ORIGINATOR
Yes
Yes
Yes
Yes
Yes
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