Skip to Content
Contact PDMR
|
PDMR Database User Guide
Home
Patient
Patient Specimen
Sample (PDX or In Vitro Culture)
Distribution Lots
Genomic Analysis
Reports
Search
Specimen
Cancel
Patient ID
661828
Open Patient
Specimen ID
353-R
Disease Body Location
Digestive/Gastrointestinal
OncoTree Code
PAAD
CTEP SDC Code
10052747 - Adenocarcinoma - pancreas
Human Pathogen
Testing Summary
Negative
Tissue Type
Resection
Tissue Collected
Pancreas [distal]
Provided Tissue Origin
Primary
Collection Date
12/2019
Age at Sampling
67
General Model Information
Model Notes
NGS Characterization
Able to Viably Passage
into Athymic Nude Mice?
Yes
Mouse Strain Used
for Engraftment
NSG (NOD.Cg-Prkdc[scid]Il2rg[tm1Wjl]/SzJ)
Viable Passage
Implantation Site
Subcutaneous (flank)
MSI Status
MSI-Stable
HLA Profile(s)
A1
A2
B1
B2
C1
C2
PDX Concordance / PDM Type
A*01:01
A*24:02
B*07:02
B*15:01
C*03:04
C*07:02
6/6
PDX Metastatic in NSG?
Not Observed
PDX Growth Curve Data (if available)
Growth Curve Analysis
View
Passage
Growth Curve
Growth Curve Notes
0
1
2
3
Export
Consensus Genomic Variants from WES Files
External Consensus Genomic Variants Data
A data file is available if a Download link is displayed:
Consensus Whole Exome Sequence (*.vcf)
Download
Ver:
2.0
Consensus Whole Exome Sequence, annotated (*.maf)
Download
Ver:
2.0
Distribution Lots
View
PDM Type
Name
Max. Passage
Cryovial for
PDX Generation
In Vitro
Culture Material
PDX
DNA Vials
PDX
RNA Vials
PDX Flash-
Frozen Vials
PDX
661828-353-R
3
Available
Not Applicable
Available Upon Request
Available Upon Request
Available
Export
Sample (PDX)
View
PDM Type
Sample ID
Patient/Originating
Specimen
PDX Passage
Sample Images
Avail
OncoKB Gene
Panel Data
Whole Exome
Sequence Avail
RNASeq
Avail
PDX
F7J
No
0
Yes
Yes
Yes
Yes
PDX
F7JC98J66
No
2
Yes
Yes
Yes
Yes
PDX
F7JC98J69
No
2
Yes
Yes
Yes
Yes
PDX
F7JC98J75
No
2
Yes
Yes
Yes
Yes
PDX
F7JE03K45
No
2
Yes
No
No
No
PDX
F7JC98J69_RG-N62
No
3
Yes
Yes
Yes
Yes
Export
1 - 6