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Sample (PDX or In Vitro Culture)
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Sample
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Patient ID
111316
Open Patient
Specimen ID
319-R
Open Specimen
Sample ID
AH6T28
Disease Body Location
Digestive/Gastrointestinal
OncoTree Code
GIST
CTEP SDC Code
10051066 - Gastrointestinal stromal tumor
PDM Type
PDX
Tissue Type
Resection
Patient/Originating
Specimen
Yes
No
Passage of this Sample
1
Sample
Notes
Pathology Data (if available)
Pathology Data
View
Tumor
Grade
Tumor
Content
Necrosis
Stromal
Inflammatory
Cells
Low Magnification Image
High Magnification Image
<Unknown>
90%
0%
10%
Absent/No Inflammation
Export
Genomic Analysis
External Genetic Analysis Data
A data file is available if a Download link is displayed:
Somatic Mutations Associated with Cancer (*.vcf and *.maf)
Whole Exome Sequencing (*.vcf)
Whole Exome FASTQ (*.FASTQ.gz; for paired-end sequence, download both files)
RNASeq FASTQ (*.FASTQ.gz; for paired-end sequence, download both files)
RNASeq Transcripts per Million (TPM; *.RSEM.genes.results and *.RSEM.isoforms.results tab-delimited text file)
OncoKB Gene Panel
no data found