Sample Editor (PDX or In Vitro Culture)

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NIH, National Cancer

Institute, Division of Cancer Treatment and Diagnosis (DCTD)

Sample

937748

129-R

Value Required

E6CQ84T46

Disease Body Location

Gynecologic

UEC

10014735 - Endometrioid endomet. adenocar.

Value Required

PDX

Resection

Patient/Originating
Specimen

Passage of this Sample

2

Sample
Notes

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Pathology Data (if available)

Pathology Data

View	Tumor Grade	Tumor Content	Necrosis	Stromal	Inflammatory Cells	Low Magnification Image	High Magnification Image
	Intermediate grade or moderately differentiated	40%	55%	5%	Absent/No Inflammation

Genomic Analysis

External Genetic Analysis Data

A data file is available if a Download link is displayed:

2.0.2.51.0

Download Read1 FASTQ

Download Read2 FASTQ

2.0.2.51.0

Download Read1 FASTQ

Download Read2 FASTQ

2.0.2.21.0

Download RSEM (genes)

Download RSEM (isoforms)

2.0.2.21.0

OncoKB Gene Panel

View	Hugo Symbol	HGVS Protein Change	Variant Allele Frequency	Total Reads	Variant Class	Oncogenicity	Predicted Functional Effect	OncoKB Version
	ARID1A	p.K1072Nfs*21	0.4809	131	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12
	ARID1A	p.D1850Tfs*33	0.5000	344	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12
	ARID4B	p.T939Rfs*2	0.3398	309	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12
	ARID4B	p.K209Rfs*37	0.3452	84	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12
	BCOR	p.N1459S	0.5140	107	Missense_Mutation	Likely Oncogenic	Unknown	v4.12
	CTCF	p.A137Lfs*17	0.4970	167	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12
	EGFR	p.I740_K745dup	0.9758	124	In_Frame_Ins	Oncogenic	Likely Gain-of-function	v4.12
	EZH2	p.A682V	0.5143	70	Missense_Mutation	Likely Oncogenic	Likely Gain-of-function	v4.12
	INPPL1	p.Q797*	0.5224	67	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v4.12
	INPPL1	p.R1156Gfs*46	0.4066	241	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12
	KMT2B	p.K553Nfs*52	0.5029	1020	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12
	KMT2C	p.K2797Rfs*26	0.3780	127	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12
	KMT2D	p.G5182Afs*61	0.4401	559	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12
	MSH6	p.F1088Sfs*2	0.3216	538	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12
	NFE2L2	p.R34G	0.5000	82	Missense_Mutation	Likely Oncogenic	Likely Gain-of-function	v4.12
	PIK3CA	p.P104L	0.5250	40	Missense_Mutation	Likely Oncogenic	Likely Gain-of-function	v4.12
	PTEN	p.X212_splice	1.0000	117	Splice_Site	Likely Oncogenic	Likely Loss-of-function	v4.12
	RB1	p.R358*	0.4697	66	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v4.12
	SPEN	p.P3317Rfs*83	0.4364	385	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12
	TSC1	p.G1035S	0.4948	382	Missense_Mutation	Likely Neutral	Neutral	v4.12
	ZFHX3	p.R1893Gfs*35	0.4759	187	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12
	ARHGAP35	p.Q1482Sfs*317	0.5468	203	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12
	ZFP36L2	p.S448Afs*13	0.4565	46	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.12

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