Sample Editor (PDX or In Vitro Culture)

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NIH, National Cancer

Institute, Division of Cancer Treatment and Diagnosis (DCTD)

Sample

121662

129-R

Value Required

K6JEQ6

Disease Body Location

Respiratory/Thoracic

LUAD

10025032 - Lung adenocarcinoma

Value Required

PDX

Resection

Patient/Originating
Specimen

Passage of this Sample

1

Sample
Notes

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Pathology Data (if available)

Pathology Data

View	Tumor Grade	Tumor Content	Necrosis	Stromal	Inflammatory Cells	Low Magnification Image	High Magnification Image
	High grade or poorly differentiated	80%	0%	20%	2+ (Moderate)

Genomic Analysis

External Genetic Analysis Data

A data file is available if a Download link is displayed:

2.0.2.51.0

Download Read1 FASTQ

Download Read2 FASTQ

2.0.2.51.0

Download Read1 FASTQ

Download Read2 FASTQ

2.0.2.21.0

Download RSEM (genes)

Download RSEM (isoforms)

2.0.2.21.0

OncoKB Gene Panel

View	Hugo Symbol	HGVS Protein Change	Variant Allele Frequency	Total Reads	Variant Class	Oncogenicity	Predicted Functional Effect	OncoKB Version
	None Found	p.R463*	0.5040	125	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v4.29
	ATM	p.F858L	0.3028	218	Missense_Mutation	Likely Neutral	Likely Neutral	v4.29
	KRAS	p.G12C	0.4304	237	Missense_Mutation	Oncogenic	Gain-of-function	v4.29
	MST1	p.D475Qfs*52	0.1955	220	Frame_Shift_Ins	Likely Oncogenic	Likely Loss-of-function	v4.29
	TP53	p.E298*	0.6085	189	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v4.29
	TP53	p.P152Rfs*18	0.5678	118	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.29

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