Sample Editor (PDX or In Vitro Culture)

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NIH, National Cancer

Institute, Division of Cancer Treatment and Diagnosis (DCTD)

Sample

121662

129-R

Value Required

K6JEQ9

Disease Body Location

Respiratory/Thoracic

LUAD

10025032 - Lung adenocarcinoma

Value Required

PDX

Resection

Patient/Originating
Specimen

Passage of this Sample

1

Sample
Notes

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Pathology Data (if available)

Pathology Data

View	Tumor Grade	Tumor Content	Necrosis	Stromal	Inflammatory Cells	Low Magnification Image	High Magnification Image
	High grade or poorly differentiated	80%	0%	20%	2+ (Moderate)

Genomic Analysis

External Genetic Analysis Data

A data file is available if a Download link is displayed:

2.0.2.51.0

Download Read1 FASTQ

Download Read2 FASTQ

2.0.2.51.0

Download Read1 FASTQ

Download Read2 FASTQ

2.0.2.21.0

Download RSEM (genes)

Download RSEM (isoforms)

2.0.2.21.0

OncoKB Gene Panel

View	Hugo Symbol	HGVS Protein Change	Variant Allele Frequency	Total Reads	Variant Class	Oncogenicity	Predicted Functional Effect	OncoKB Version
	None Found	p.R463*	0.5670	97	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v4.29
	ATM	p.F858L	0.3901	182	Missense_Mutation	Likely Neutral	Likely Neutral	v4.29
	KRAS	p.G12C	0.5058	259	Missense_Mutation	Oncogenic	Gain-of-function	v4.29
	LATS2	p.P477_A480dup	0.1613	31	In_Frame_Ins	Likely Oncogenic	Unknown	v4.29
	MST1	p.D475Qfs*52	0.1538	169	Frame_Shift_Ins	Likely Oncogenic	Likely Loss-of-function	v4.29
	TP53	p.E298*	0.4476	210	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v4.29
	TP53	p.P152Rfs*18	0.5116	129	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v4.29

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