Sample Editor (PDX or In Vitro Culture)

Skip to Content

NIH, National Cancer

Institute, Division of Cancer Treatment and Diagnosis (DCTD)

Sample

695669

166-R

Value Required

WR6VC6

Disease Body Location

Skin

MEL

10053571 - Melanoma

Value Required

PDX

Resection

Patient/Originating
Specimen

Passage of this Sample

1

Sample
Notes

Hide or show region

Pathology Data (if available)

Genomic Analysis

External Genetic Analysis Data

A data file is available if a Download link is displayed:

2.0.1.50.0

Download Read1 FASTQ

Download Read2 FASTQ

1.2

Download Read1 FASTQ

Download Read2 FASTQ

1.2

Download RSEM (genes)

Download RSEM (isoforms)

2.0.1.4.0

OncoKB Gene Panel

View	Hugo Symbol	HGVS Protein Change	Variant Allele Frequency	Total Reads	Variant Class	Oncogenicity	Predicted Functional Effect	OncoKB Version
	ARID1B	p.E2188*	0.4448	335	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	ARID2	p.R274*	1.0000	64	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	BRAF	p.V600K	0.6625	80	Missense_Mutation	Oncogenic	Gain-of-function	v3.14
	EGFR	p.S306L	0.4572	269	Missense_Mutation	Likely Neutral	Likely Neutral	v3.14
	KMT2B	p.W1786*	0.5000	156	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	NF1	p.R1241*	0.4550	189	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	NF1	p.R2450*	0.5188	133	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	PTPRD	p.R1088C	0.3700	100	Missense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	RAC1	p.P29S	0.5301	83	Missense_Mutation	Oncogenic	Gain-of-function	v3.14
	SMARCA4	p.R1135Q	0.4122	148	Missense_Mutation	Likely Oncogenic	Unknown	v3.14
	TP53BP1	p.R639*	0.4979	243	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14

1 - 11