Sample Editor (PDX or In Vitro Culture)

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NIH, National Cancer

Institute, Division of Cancer Treatment and Diagnosis (DCTD)

Sample

466636

057-R

Value Required

IJ4M96

Disease Body Location

Digestive/Gastrointestinal

PAAD

10052747 - Adenocarcinoma - pancreas

Value Required

PDX

Resection

Patient/Originating
Specimen

Passage of this Sample

1

Sample
Notes

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Pathology Data (if available)

Pathology Data

View	Tumor Grade	Tumor Content	Necrosis	Stromal	Inflammatory Cells	Low Magnification Image	High Magnification Image
	Intermediate grade or moderately differentiated	75%	%	25%	1+ (Low)

Genomic Analysis

External Genetic Analysis Data

A data file is available if a Download link is displayed:

2.0.1.50.0

Download Read1 FASTQ

Download Read2 FASTQ

1.2

Download Read1 FASTQ

Download Read2 FASTQ

1.2

Download RSEM (genes)

Download RSEM (isoforms)

2.0.1.4.0

OncoKB Gene Panel

View	Hugo Symbol	HGVS Protein Change	Variant Allele Frequency	Total Reads	Variant Class	Oncogenicity	Predicted Functional Effect	OncoKB Version
	CDKN2A	p.L16Pfs*9	1.0000	80	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	KMT2C	p.Q755*	0.1060	368	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	KMT2C	p.K617Nfs*12	0.5596	109	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	KRAS	p.G12R	0.4133	150	Missense_Mutation	Oncogenic	Gain-of-function	v3.14
	SMAD4	p.R361H	1.0000	79	Missense_Mutation	Likely Oncogenic	Loss-of-function	v3.14
	TP53	p.R213*	1.0000	84	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14

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