Sample Editor (PDX or In Vitro Culture)

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NIH, National Cancer

Institute, Division of Cancer Treatment and Diagnosis (DCTD)

Sample

474377

126-R

Value Required

FFYEV7FP9_RG-C68

Disease Body Location

Gynecologic

UCEC

10014735 - Endometrioid endomet. adenocar.

Value Required

PDX

Resection

Patient/Originating
Specimen

Passage of this Sample

3

Sample
Notes

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Pathology Data (if available)

Pathology Data

View	Tumor Grade	Tumor Content	Necrosis	Stromal	Inflammatory Cells	Low Magnification Image	High Magnification Image
	Intermediate grade or moderately differentiated	80%	5%	15%	3+ (High)

Genomic Analysis

External Genetic Analysis Data

A data file is available if a Download link is displayed:

2.0.1.51.0

Download Read1 FASTQ

Download Read2 FASTQ

2.0.1.51.0

Download Read1 FASTQ

Download Read2 FASTQ

2.0.1.4.0

Download RSEM (genes)

Download RSEM (isoforms)

2.0.1.4.0

OncoKB Gene Panel

View	Hugo Symbol	HGVS Protein Change	Variant Allele Frequency	Total Reads	Variant Class	Oncogenicity	Predicted Functional Effect	OncoKB Version
	APC	p.H298Lfs*28	0.5017	303	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	APC	p.S1465Wfs*3	0.5708	233	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	APC	p.T1556Nfs*3	0.4505	111	Frame_Shift_Ins	Likely Oncogenic	Likely Loss-of-function	v3.14
	ARID1A	p.P224Rfs*8	0.5000	430	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	ARID1A	p.K1072Nfs*21	0.4459	148	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	ARID5B	p.T436Sfs*10	0.3571	210	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	BLM	p.N515Mfs*16	0.5045	222	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	CIC	p.P1248Hfs*54	0.1398	93	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	CUX1	p.R1462Afs*34	0.3136	118	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	DICER1	p.V1731Sfs*2	0.4853	204	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	ERF	p.G299Efs*12	0.5167	180	Frame_Shift_Del	Likely Oncogenic	Loss-of-function	v3.14
	FBXW7	p.S668Vfs*39	0.4330	224	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	HNF1A	p.P291Qfs*51	0.4053	338	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	KMT2B	p.G1199Afs*156	0.4728	184	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	KMT2B	p.G1879Vfs*16	0.4926	136	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	KMT2C	p.K2797Rfs*26	0.4404	109	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	KMT2D	p.G1235Vfs*95	0.4696	460	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	MAP3K1	p.Q1248*	0.4848	328	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	MAX	p.R60Q	0.4932	146	Missense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	MED12	p.E185*	0.7692	78	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	MLH1	p.K461*	0.5412	255	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	MLH1	p.R470Efs*21	0.4664	268	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	NF1	p.Y628Tfs*3	0.5227	132	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	PAX5	p.A322Lfs*11	0.5210	238	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	PAX5	p.V26Ffs*3	0.3628	215	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	PIK3CA	p.E110del	0.5522	67	In_Frame_Del	Oncogenic	Gain-of-function	v3.14
	PMS2	p.D414Tfs*34	0.4801	302	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	PTEN	p.N323Kfs*2	0.9884	172	Frame_Shift_Ins	Likely Oncogenic	Likely Loss-of-function	v3.14
	RAD50	p.K722Rfs*14	0.5573	262	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	ZFHX3	p.E2424Gfs*4	0.5655	168	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	PPM1D	p.N512Kfs*16	0.4607	369	Frame_Shift_Ins	Likely Oncogenic	Likely Gain-of-function	v3.14

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