Sample Editor (PDX or In Vitro Culture)

Skip to Content

NIH, National Cancer

Institute, Division of Cancer Treatment and Diagnosis (DCTD)

Sample

144983

106-R

Value Required

ORIGINATOR

Disease Body Location

Gynecologic

HGONEC

10033272 - Ovarian cancer, NOS

Value Required

Patient/Originator Specimen

Resection

Patient/Originating
Specimen

Passage of this Sample

Sample
Notes

Hide or show region

Pathology Data (if available)

Pathology Data

View	Tumor Grade	Tumor Content	Necrosis	Stromal	Inflammatory Cells	Low Magnification Image	High Magnification Image
	High grade or poorly differentiated	60%	30%	10%	1+ (Low)

Genomic Analysis

External Genetic Analysis Data

A data file is available if a Download link is displayed:

2.0.2.51.0

Download Read1 FASTQ

Download Read2 FASTQ

2.0.2.51.0

Download Read1 FASTQ

Download Read2 FASTQ

2.0.2.4.0

Download RSEM (genes)

Download RSEM (isoforms)

2.0.2.4.0

OncoKB Gene Panel

View	Hugo Symbol	HGVS Protein Change	Variant Allele Frequency	Total Reads	Variant Class	Oncogenicity	Predicted Functional Effect	OncoKB Version
	CDH1	p.A617T	0.4917	301	Missense_Mutation	Likely Oncogenic	Loss-of-function	v3.14
	CTNNB1	p.D32N	0.4481	183	Missense_Mutation	Likely Oncogenic	Gain-of-function	v3.14
	MED12	p.D23Y	0.4544	482	Missense_Mutation	Oncogenic	Likely Loss-of-function	v3.14
	PIK3CA	p.H1047R	0.3987	627	Missense_Mutation	Oncogenic	Gain-of-function	v3.14
	PPP2R1A	p.R183W	0.4336	226	Missense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	SMARCA4	p.E1292*	0.9114	542	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14

1 - 6