Sample Editor (PDX or In Vitro Culture)

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NIH, National Cancer

Institute, Division of Cancer Treatment and Diagnosis (DCTD)

Sample

144983

106-R

Value Required

EA2T11

Disease Body Location

Gynecologic

HGONEC

10033272 - Ovarian cancer, NOS

Value Required

PDX

Resection

Patient/Originating
Specimen

Passage of this Sample

1

Sample
Notes

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Pathology Data (if available)

Pathology Data

View	Tumor Grade	Tumor Content	Necrosis	Stromal	Inflammatory Cells	Low Magnification Image	High Magnification Image
	High grade or poorly differentiated	35%	60%	5%	1+ (Low)

Genomic Analysis

External Genetic Analysis Data

A data file is available if a Download link is displayed:

2.0.2.51.0

Download Read1 FASTQ

Download Read2 FASTQ

2.0.2.51.0

Download Read1 FASTQ

Download Read2 FASTQ

2.0.2.4.0

Download RSEM (genes)

Download RSEM (isoforms)

2.0.2.4.0

OncoKB Gene Panel

View	Hugo Symbol	HGVS Protein Change	Variant Allele Frequency	Total Reads	Variant Class	Oncogenicity	Predicted Functional Effect	OncoKB Version
	CDH1	p.A617T	0.4451	173	Missense_Mutation	Likely Oncogenic	Loss-of-function	v3.14
	CTNNB1	p.D32N	0.4538	119	Missense_Mutation	Likely Oncogenic	Gain-of-function	v3.14
	MED12	p.D23Y	0.5444	439	Missense_Mutation	Oncogenic	Likely Loss-of-function	v3.14
	PIK3CA	p.H1047R	0.4855	447	Missense_Mutation	Oncogenic	Gain-of-function	v3.14
	PPP2R1A	p.R183W	0.5143	105	Missense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	SMARCA4	p.E1292*	0.9892	371	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14

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