Sample Editor (PDX or In Vitro Culture)

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NIH, National Cancer

Institute, Division of Cancer Treatment and Diagnosis (DCTD)

Sample

765638

272-R

Value Required

AG3AX5

Disease Body Location

Respiratory/Thoracic

LUSC

10025126 - Squamous cell lung carcinoma

Value Required

PDX

Resection

Patient/Originating
Specimen

Passage of this Sample

1

Sample
Notes

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Pathology Data (if available)

Pathology Data

View	Tumor Grade	Tumor Content	Necrosis	Stromal	Inflammatory Cells	Low Magnification Image	High Magnification Image
	High grade or poorly differentiated	50%	30%	20%	1+ (Low)

Genomic Analysis

External Genetic Analysis Data

A data file is available if a Download link is displayed:

2.0.1.50.0

Download Read1 FASTQ

Download Read2 FASTQ

1.2

Download Read1 FASTQ

Download Read2 FASTQ

1.2

Download RSEM (genes)

Download RSEM (isoforms)

2.0.1.13.0

OncoKB Gene Panel

View	Hugo Symbol	HGVS Protein Change	Variant Allele Frequency	Total Reads	Variant Class	Oncogenicity	Predicted Functional Effect	OncoKB Version
	APC	p.Q1303*	0.9958	240	Nonsense_Mutation	Likely Oncogenic	Likely Loss-of-function	v3.14
	BRCA2	p.G602R	0.3512	336	Missense_Mutation	Inconclusive	Inconclusive	v3.14
	DICER1	p.X1032_splice	0.4393	239	Splice_Site	Likely Oncogenic	Likely Loss-of-function	v3.14
	NFE2L2	p.G31V	0.6333	150	Missense_Mutation	Oncogenic	Gain-of-function	v3.14
	SESN1	p.V263Ffs*63	0.7410	529	Frame_Shift_Del	Likely Oncogenic	Likely Loss-of-function	v3.14
	TP53	p.X33_splice	1.0000	81	Splice_Site	Likely Oncogenic	Likely Loss-of-function	v3.14

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